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Fix incompatible Docker Daemon Version in Devcontainer (for modules)#9921

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mashehu merged 1 commit intonf-core:masterfrom
JulianFlesch:issues9801/devcontainer
Feb 10, 2026
Merged

Fix incompatible Docker Daemon Version in Devcontainer (for modules)#9921
mashehu merged 1 commit intonf-core:masterfrom
JulianFlesch:issues9801/devcontainer

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@JulianFlesch
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Fixes #9801
Analogous PR for tools: nf-core/tools#4029

Limitations:

  • This is forcing the use of a deprecated API version.
  • This is intended as a short-term fix until the docker daemon on codespaces is updated.

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

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@mashehu mashehu left a comment

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i keep running into this issue, so will merge for now

@mashehu mashehu marked this pull request as ready for review February 10, 2026 10:41
@mashehu mashehu requested review from a team as code owners February 10, 2026 10:41
@mashehu mashehu added this pull request to the merge queue Feb 10, 2026
Merged via the queue into nf-core:master with commit c792d8d Feb 10, 2026
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Docker API version mismatch in devcontainer

3 participants