GitHub - likit/BioUtils: Python scripts for miscellaneous bioinformatics stuff.

Name		Name	Last commit message	Last commit date
Latest commit History 61 Commits
LICENSE.md		LICENSE.md
README.txt		README.txt
assemgraph.py		assemgraph.py
assemgraph2.py		assemgraph2.py
bed2bed.py		bed2bed.py
david2expr.py		david2expr.py
dexseq_exon_change.py		dexseq_exon_change.py
dexseq_filter.py		dexseq_filter.py
extract_alignments_psl.py		extract_alignments_psl.py
extract_mapped_seq.py		extract_mapped_seq.py
fasta2bed.py		fasta2bed.py
fetch_entrez_from_geneid.py		fetch_entrez_from_geneid.py
fetch_entrez_seq.py		fetch_entrez_seq.py
gene_model_match.py		gene_model_match.py
gene_overlap.py		gene_overlap.py
genome_var.py		genome_var.py
get_align_sequence_psl.py		get_align_sequence_psl.py
get_ens_name.py		get_ens_name.py
get_fasta_seq.py		get_fasta_seq.py
get_reads_from_sam.py		get_reads_from_sam.py
header_to_bed.py		header_to_bed.py
interval-coverage-bed.py		interval-coverage-bed.py
json_parser.py		json_parser.py
locate_promoter_from_peaks.py		locate_promoter_from_peaks.py
map2CisGenome.py		map2CisGenome.py
mapped_seq.py		mapped_seq.py
oligo_formatter_mothur.sh		oligo_formatter_mothur.sh
psl_cov.py		psl_cov.py
qsub.py		qsub.py
read_error_profile.py		read_error_profile.py
remove_seq_with_barcode.py		remove_seq_with_barcode.py
rename_exon_region.py		rename_exon_region.py
sam2fq.py		sam2fq.py
size_select.py		size_select.py
split-paired.py		split-paired.py
split_fasta.py		split_fasta.py
split_sequence.py		split_sequence.py
transcript2gene.py		transcript2gene.py
unmapped_seq.py		unmapped_seq.py
unmapped_seq2.py		unmapped_seq2.py
unmapped_seq3.py		unmapped_seq3.py

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A collection of custom Python scripts for bioinformatics research.

Python scripts for miscellaneous bioinformatics stuff.

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