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docs: align pipeline artifact layout with smoke test#96

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VISHNU0906 wants to merge 1 commit intoeellak:developmentfrom
VISHNU0906:docs/pipeline-artifact-layout
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docs: align pipeline artifact layout with smoke test#96
VISHNU0906 wants to merge 1 commit intoeellak:developmentfrom
VISHNU0906:docs/pipeline-artifact-layout

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Fixes #92

The pipeline smoke test asserts that resumability state and debug folders live inside the markdown/ and clean_markdown/ directories (per-stage), not at the output root.

This updates docs/pipeline.md to match the tested artifact contract by:

  • documenting markdown/.processing_state.pkl and clean_markdown/.processing_state.pkl
  • documenting problematic_files/ + timeout_files/ under both markdown folders
  • updating the artifact tree to distinguish canonical vs runtime/debug outputs.

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