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@DerangedIons

Deranged Ions

DerangedIons

Computational models of cardiac electrophysiology, energetics, and contraction, applied to clinically relevant stressors: ischemia, hemorrhage, beta-adrenergic drive, mitochondrial dysfunction, and trauma.

What we work on

  • Cardiac cell models. Published myocyte models (ToR-ORd, Gauthier 2012, Colman 2019, …) reimplemented in Julia / SciML for composability and reuse.
  • Excitation–contraction coupling and mitochondrial energetics. Coupled whole-cell models linking calcium handling, force generation, and ATP supply.
  • Beta-adrenergic and signaling pathways. Upstream signaling layered onto the electrophysiology stack.
  • Trauma and hemorrhage. Windkessel and 0D electromechanical models targeting battlefield-relevant physiology.
  • Numerics and infrastructure. Rush–Larsen integrators, debugging tools, and shared tooling across the model packages.

Pinned Loading

  1. CytoZoo.jl CytoZoo.jl Public

    A repository of cell models in the Julia language, ready to run.

    Julia 2

  2. GongBetaAdrenergicSignaling.jl GongBetaAdrenergicSignaling.jl Public

    A Julia package providing a ModelingToolkit.jl implementation of the Gong et al. (2020) beta-adrenergic signaling model for cardiac myocytes.

    Julia 3

Repositories

Showing 6 of 6 repositories

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