Issues

• Add missing C4 algorithm steps

  bug
  ComputationalCryoEM/ASPIRE-Python#1414 · Filter by author j-c-c opened on Oct 6, 2026
  

• Coupled Simulation random sequences

  bugcleanupsupport
  Task

  ComputationalCryoEM/ASPIRE-Python#1406 · Filter by author garrettwrong opened on Sep 10, 2026
  

• Numpy RandomState Deprecation

  bugcleanupdependenciesexternsupport
  Task

  ComputationalCryoEM/ASPIRE-Python#1405 · Filter by author garrettwrong opened on Sep 10, 2026
  

• Remove CVXPY warning filter

  CIcleanupextern
  ComputationalCryoEM/ASPIRE-Python#1403 · Filter by author j-c-c opened on Aug 5, 2026

• mrcfile numpy >= 2.5 deprecation

  bugexterngood first issue
  Bug

  ComputationalCryoEM/ASPIRE-Python#1392 · Filter by author garrettwrong opened on Jun 23, 2026
  1

  

• Generic EMDB Downloader

  enhancementgood first issuesupport
  Feature

  ComputationalCryoEM/ASPIRE-Python#1390 · Filter by author garrettwrong opened on Jun 15, 2026

• D2 Sync

  bugsupport
  Bug

  ComputationalCryoEM/ASPIRE-Python#1389 · Filter by author garrettwrong opened on Jun 15, 2026
  1

  

• CI Warning Catching System

  CIcleanupgood first issue
  ComputationalCryoEM/ASPIRE-Python#1375 · Filter by author garrettwrong opened on Apr 9, 2026
  3

• Validate CL/PF Rays

  cleanuptheory
  Task

  ComputationalCryoEM/ASPIRE-Python#1342 · Filter by author garrettwrong opened on Nov 25, 2025

• Improvetest_orient_sync_voting

  cleanup
  ComputationalCryoEM/ASPIRE-Python#1340 · Filter by author garrettwrong opened on Nov 17, 2025
  1

  

• ImageSource.save() does not write Relion >=3.1 starfiles

  bugcleanupextern
  ComputationalCryoEM/ASPIRE-Python#1329 · Filter by author j-c-c opened on Oct 9, 2025

• Metadata Dtypes

  cleanup
  Task

  ComputationalCryoEM/ASPIRE-Python#1328 · Filter by author garrettwrong opened on Oct 7, 2025
  

• Flaky boosting tests

  ComputationalCryoEM/ASPIRE-Python#1325 · Filter by author garrettwrong opened on Sep 17, 2025

• Port VDM

  enhancement
  ComputationalCryoEM/ASPIRE-Python#1316 · Filter by author garrettwrong opened on Aug 6, 2025

• FLE2D updates

  bugcleanupenhancementextern
  ComputationalCryoEM/ASPIRE-Python#1313 · Filter by author garrettwrong opened on Aug 4, 2025
  19

  

• Filter Boundary Options

  enhancement
  Feature

  ComputationalCryoEM/ASPIRE-Python#1294 · Filter by author garrettwrong opened on Jun 18, 2025
  

• Volume Recon Gallery Tutorial

  documentationenhancementsupport
  Task

  ComputationalCryoEM/ASPIRE-Python#1293 · Filter by author garrettwrong opened on Jun 18, 2025

• MicrographSource need to support rectangular shapes

  bugcleanup
  Task

  ComputationalCryoEM/ASPIRE-Python#1287 · Filter by author garrettwrong opened on Jun 5, 2025
  

• mean_aligned_angular_distance w/ symmetry

  ComputationalCryoEM/ASPIRE-Python#1283 · Filter by author j-c-c opened on May 29, 2025

• Problems with find_registration

  ComputationalCryoEM/ASPIRE-Python#1271 · Filter by author janden opened on May 9, 2025
  14

• Validate Volume.project against Matlab

  ComputationalCryoEM/ASPIRE-Python#1257 · Filter by author j-c-c opened on Apr 3, 2025

• Validate IndexedSource/Simulation interaction

  bugcleanup
  Bug

  ComputationalCryoEM/ASPIRE-Python#1236 · Filter by author garrettwrong opened on Feb 20, 2025

• Github Cache Action - Remove repetitive step

  CIcleanup
  ComputationalCryoEM/ASPIRE-Python#1229 · Filter by author j-c-c opened on Feb 13, 2025

• Remove scipy<1.15.0 workaround

  CIcleanupextern
  ComputationalCryoEM/ASPIRE-Python#1220 · Filter by author garrettwrong opened on Jan 7, 2025

• D2 follow up tasks

  cleanup
  ComputationalCryoEM/ASPIRE-Python#1177 · Filter by author j-c-c opened on Sep 20, 2024