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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 24 34

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    40 49

Repositories

Showing 10 of 526 repositories
  • NEDSS-DataIngestion Public

    Data Ingestion for Modernization of NEDSS Project by Enquizit

    CDCgov/NEDSS-DataIngestion’s past year of commit activity
    Java 9 Apache-2.0 7 0 16 Updated Mar 11, 2026
  • cfa-vap-hm Public

    nix-home-manager config, forked with appreciation from giomrella

    CDCgov/cfa-vap-hm’s past year of commit activity
    Nix 0 0 0 0 Updated Mar 11, 2026
  • cfa-stf-routine-forecasting Public

    Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.

    CDCgov/cfa-stf-routine-forecasting’s past year of commit activity
    Python 16 Apache-2.0 3 63 4 Updated Mar 11, 2026
  • CDCgov/NEDSS-Modernization’s past year of commit activity
    Java 25 7 0 18 Updated Mar 11, 2026
  • MIRA-NF Public
    CDCgov/MIRA-NF’s past year of commit activity
    Nextflow 16 MIT 7 1 0 Updated Mar 11, 2026
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 96 Apache-2.0 36 10 0 Updated Mar 11, 2026
  • dibbs-azure Public
    CDCgov/dibbs-azure’s past year of commit activity
    HCL 1 CC0-1.0 2 0 3 Updated Mar 11, 2026
  • CDCgov/id-bioifx-workshop’s past year of commit activity
    HTML 0 Apache-2.0 1 0 9 Updated Mar 10, 2026
  • MicrobeTrace Public Forked from AABoyles/MicrobeTrace

    The Visualization Multitool for Molecular Epidemiology and Bioinformatics

    CDCgov/MicrobeTrace’s past year of commit activity
    TypeScript 98 45 57 14 Updated Mar 10, 2026
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    CSS 82 CC0-1.0 44 1,173 116 Updated Mar 10, 2026