diff --git a/src/org/pathvisio/bridgedb/BridgeDbConfigDlg.java b/src/org/pathvisio/bridgedb/BridgeDbConfigDlg.java index 093fbd0..f8388d6 100644 --- a/src/org/pathvisio/bridgedb/BridgeDbConfigDlg.java +++ b/src/org/pathvisio/bridgedb/BridgeDbConfigDlg.java @@ -49,7 +49,7 @@ import org.bridgedb.gui.BridgeDbParameterModel; import org.pathvisio.bridgedb.BridgeDbConfigPlugin.AdvancedSynonymPreferences; import org.pathvisio.core.data.GdbManager; -import org.pathvisio.core.debug.Logger; +import org.pathvisio.libgpml.debug.Logger; import org.pathvisio.core.preferences.PreferenceManager; import com.jgoodies.forms.layout.CellConstraints; @@ -239,6 +239,7 @@ private void addPressed() catch (IDMapperException ex) { //TODO: redundant with SwingEngine.selectGdb + //To Do: indicate what the exact error is (e.g. file not found, wrong format, etc.) String msg = "Failed to open database; " + ex.getMessage(); JOptionPane.showMessageDialog(null, "Error: " + msg + "\n\n" + "See the error log for details.", diff --git a/src/org/pathvisio/bridgedb/BridgeDbConfigPlugin.java b/src/org/pathvisio/bridgedb/BridgeDbConfigPlugin.java index 8d97690..6cf31f9 100644 --- a/src/org/pathvisio/bridgedb/BridgeDbConfigPlugin.java +++ b/src/org/pathvisio/bridgedb/BridgeDbConfigPlugin.java @@ -29,7 +29,7 @@ import org.bridgedb.gui.OrthoXmlParameterModel; import org.bridgedb.gui.PgdbParameterModel; import org.pathvisio.core.data.GdbManager; -import org.pathvisio.core.debug.Logger; +import org.pathvisio.libgpml.debug.Logger; import org.pathvisio.core.preferences.Preference; import org.pathvisio.core.preferences.PreferenceManager; import org.pathvisio.desktop.PvDesktop; diff --git a/src/org/pathvisio/bridgedb/IdMapperDlg.java b/src/org/pathvisio/bridgedb/IdMapperDlg.java index 05e5c86..9b06530 100644 --- a/src/org/pathvisio/bridgedb/IdMapperDlg.java +++ b/src/org/pathvisio/bridgedb/IdMapperDlg.java @@ -27,7 +27,7 @@ import org.bridgedb.gui.BridgeDbParameterModel; import org.bridgedb.gui.ParameterPanel; -import org.pathvisio.core.debug.Logger; +import org.pathvisio.libgpml.debug.Logger; public class IdMapperDlg extends JDialog implements ActionListener, HyperlinkListener {